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Gene Neuron Source
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ace-1 4-6 head nrns, v-cord mtrs eiwm97.109
acr-5 B-type motor neurons //ross iwm97
aex-3 ~all neurons Neuron 18:613
apl-1 VA VB, other mtr nrns, head/tail nrns cli(pc)
alt-1 Ceh IL OL, some amphid nrns HSN PLM iwm99.473
cat-1 CEP ADF AIM ADE NSM VC4 VC5 PDE CAN...
HSN RIHf AIYf, (1 pair)f J Neurosci 19: 72
cat-2 CEPV CEPD ADE PDE R5A R7A R9A Development 126: 5819
cch-1 MC, some ring neurons iwm99.805; ksteger(pc)
cdh-3 VC, HSN ewm96.54
ceh-2 I3 M4 NSM M3 eiwm97.28
ceh-2 I3 NSM m2 e2 M3 iwm97.670
ceh-6 RMDV RMDD AUA AVH SABV, excr cell iwm95.138
ceh-10 RMED RID CEP ALA AVJ AIN AIY Genetics 148: 151
ceh-14 BDU PVT DVC PHA PHBL PHC PVN PVWp PVRp
AFD PHx several head/tail nrns Neuron 25: 587
ceh-17 ALA, SIAs Development 127: 3361
ceh-23 AIY BAG ASI ADL AWC ASE AFD ASH ASG...
PHx CAN Genetics 148:151
ceh-28* M4 bharfe(pc)
ceh-24 sublater & subventral head nrns ecwm96.29
ceh-36 >= 2 pairs chemo neurons iwm97.670(pc)
che-1 ASH ASE, a few others iwm99.861
che-3 all cileated sensory neurons early ewm98.p66
cfi-1 AVD PVC URA IL2 (LUA) dChelur(pc)
cgk-1 PQR PVQL, but not PVQR iwm99.801
cha-1 head: IL2 URA URB SAA SAB SIA SIB SMB..
SMD RMD RIM, sev more; phar: M1 M2 M5..
I1f I6f, others; body: VA VB VC DA DB..
AS SDQ HSNf; tail: ALN PLN others jduerr(pc), antibody
cnd-1 head nrns, DD DA1-5 eiwm97.629
cod-5 NSM ADF HSN AIMf RIHf early ecwm98.184
daf-1 many head nrns incl amphid nrns eiwm97.206
daf-4 similar to daf-1 eiwm97.206
daf-7* ASI Neuron 17:719
daf-19 all ciliated neurons Mol Cell, in press
dbl-1 CPm, RVG nrns, dorsal rectal gang nrns wbg 14(2):41
des-2 PVC PVDp IL1p, 2 in tail, 2 in head mtreinin(pc)
deg-1 AVD AVG IL1 PVC J Neurosci 17:1033
deg-3 PVC AVG IL1, touch cells Neuron 14:871
del-1 VA VB, a few others iwm99.840
eat-4 all glutaminergic neurons; OLL OLQ IL1
ASK ASH AUA AVJ/AIN ADA FLP J Neurosci 19: 159
eat-16 ~all neurons, phar muscle iwm99.664
ehs-1 ~all neurons iwm99.739
egl-10 ~all neurons early ecwm98.90
egl-17* M4 iwm97.64
egl-19 many nrns in ring, pre-anal gang wbg 14(3):50
AS DD VD DB VB DA VA iwm99.909
egl-2 AFD AQR ASE AWC BAG IL2 PQR URX...
these and others in males deweinshenker,jthomas(pc)
egl-36 AVL DVB RIA AVE ADE M3 I6 ALN ?PVC iwm97.463(pc)
egl-5 PLML PLMR, a numer of unid'd nrns wbg 15(1):49
egl-8 "most neurons" iwm99.66
fax-1 CEPD URX M1 M5 MI (RIC) (AIY) (AVK) early ecwm98.26
(SABD) (SABV) PVPL (DVA)
flp-1 AVK CEPD URX DVA PVP, 3 nrns in RVG Science 281:1686
flp-1* (promoter fragment) AVK c.li(pc); Development 127:703
flp-3 IL1D OLL URB PQR iwm99.472
flp-5 ASE RMG iwm99.472
flp-6* ASE iwm99.472
flp-8 ASE URX PVM iwm99.472
flp-12 SMB AVM PVM iwm99.472
flp-13 DD ohobert(pc)
flp-15 I2 I3 PHA iwm99.472
flp-3 IL1D OLL URB PQR iwm99.472
flr-4 AUA? other head neurons? iwm97.104(pc)
gcy-10 AWB AWC I1 Pnas 94:00
gcy-12* PHA Pnas 94:00
gcy-32 URX AQR PQR Pnas 94:00
gcy-33* BAG Pnas 94:00
gcy-5** ASER Pnas 94:00
gcy-6** ASEL Pnas 94:00
gcy-7** ASEL Pnas 94:00
gcy-8* AFD Pnas 94:00
ggr-1 (C09G5) AIB PVR PVQ AVH SMDV...
some ventral cord mtr nrns wbg 14(4):69
ggr-2 (C45B2) SMDV, SMDD, SIAV, CAN, HSN, DD wbg 14(4):69
ggr-3 (F09C12) AVA, AVB, SMDD, DVA, SIAD...
other neurons in the nerve ring wbg 14(4):69
glr-1 AVA AVB AVD AVE PVC AIB RMD RIM SMD...
AVGf PVQf URYf Nature 378:82
glr-5* RIA iwm99.881
glr-7* RIA iwm99.881
glt-1 M3, eight nrns? male tail, 6 others ecwm96.110
goa-1 all nrns Neuron 20:55
gpa-1 SPD SPV SPC (males only?) eiwm97.275
gpa-1 ADL ASH ASIf ASJ PHx Nat. Gen 21:414
gpa-2* AWC Genetics 145:715
gpa-3 ADF ADL ASE ASG ASH Genetics 145:715
gpa-4* ASI Nat. Gen 21:414
gpa-5 AWA ASIf Nat. Gen 21:414
gpa-6 AWA ASIf PHB Nat. Gen 21:414
gpa-7 many nrns, mscls cells, nrns male tail Nat. Gen 21:414
gpa-8 URX AQR PQR Nat. Gen. 21:414
gpa-9 ASJ PHB PVq Nat. Gen. 21:414
gpa-10 ADF ASI ASJ ALN CAN LUA Nat. Gen. 21:414
gpa-11 ADL ASH pharynx, lat & ventr hypodermis Nat. Gen. 21:414
gpa-13 ADF ASH AWC PHx Nat. Gen. 21:414
gpa-14 ASI ASJ ASH ASK ADE PHx ALS AVA CAN...
DVA PVQ RIA vulva muscle Nat. Gen. 21:414
gpa-15 ADL ASH ASK PHx many male nrns...
distal tip & anchor cells Nat. Gen. 21:414
gpa-16 AVM PDE PLM BDU PVC RIP pharynx bwm...
vulva muscle Nat. Gen. 21:414
gpb-2 HSN, others iwm99.866
gsa-1 all nrns Genes Devel. 11:1493; Gene 194:183
ham-2 HSN, other nrns in head and tail eiwm97.43
her-1 CP9m mwwm96.85
ida-1 Many ring neurons, VCn HSN PHx uv1 iwm99.943(pc)
ina-1 sens nrns head/tail, lcord, vcord wcwm96.50
lim-4 AWB, RMEV RMDL/R, RID, RIV, SIA, SAA Genes Dev. 13: 1794
lim-6 ASG AWA (a promoter derivative) O.Hobert(pc)
lim-6 ASEL, RMEL/R, AVL, RIS, DVB Development 126: 1547
lim-7 IL1s, OLQs (?) O.Hobert(pc)
lin-11 ADL ADF AVH (or AVJ) AVG AIZ RIC VC...
PHA PVQ J Neurosci 18: 2084
lin-4 (ALA) HSN, many head and tail neurons early ecwm98.108
lin-45 a few neurons in the head ecwm96.53
mab-18 preanal ganglion nrns wbg 14(3):36
mec-3 touch cells, FLP, PVD Genes & Devel 3:1823
mec-7 touch cells, weak expressn other nrns Devel 119:773
mec-8 head neurons(incl amphid) tail neuron iwm97.594(pc)
mec-9 touch cells, PVD Neuron 16:183
mec-18 touch cells ggu & mchalfie(pc)
mgl-1 RMDV RMD RMDD RIB AIA (ANL) (AIY) iwm97.475(pc)
mgl-2 RMD RMDV RMDD (SMDV) AVE (SMDD) AIB...
RIB some tail neurons iwm97.475(pc)
mig-1 HSN QR QL SIA SIB bwm iwm97.611
mig-13 ~10 v-cord nrns wcwm96.168
mus-1 RIB RIM AVEL AVA ADA/RMG RIV M4-5 I2 I1 iwm99.740
ncs-1 AVK AWB AWC ASE BAG PHB AIY RMG...
m1 (AFD) (ADF) (ASG) (AWA) iwm97.590(pc)
nhr-22 AWC and 9 pairs sensory neurons early ecwm98.133
nhr-38* AFD early ecwm98.133
nhr-79 ADL ASH iwm99.592
nmr-1 AVA AVD AVE PVC RIM iwm99.534
ocr-1 AWA ADLf iwm99.849
ocr-2 ASH ADL PHx AWA ADF iwm99.849
odr-1 AWC ASI AWB ASK ASJ iwm97.420
odr-2 2b AIB AIZ IL2 RIG AVG PVP ASG Chou et al. 2001 Genetics
odr-2 2b AIB AIZ (RIF) (ASG) iwm05.466
odr-2 18 SMB Chou et al. 2001 Genetics
odr-10* AWA Cell 84:899
odr-3 AWA AWB AWC Cell 91:161
odr-3 AWA AWB AWC ASHc ADFc Neuron 20:55
odr-7* AWA Cell 79:971
opt-3* AVA J Biol Chem 275, 9563
opt-3* AVE iwm05.641
osm-10 ASH ASI PHA PHB J Neurosci 19:1952
osm-3 IL2D IL2V IL2 siddiqui(pc)
osm-9 OLQ ADL AWA IL2 AWC ASE ADF ASG ASH...
ASK FLP PVD PHx J Neurosci 17:8259
pag-3 the 6 touch nrns iwm99.575
pef-1 AWB AWC AVA AVB AVX?? BAG URX (ASE) J Biological Chem 276:25127
pha-1 neurons eiwm97.132
pin-2 PVT, head sensory neuron(s) J Cell Biol 144: 45
rab-3 ~all neurons J Neurosci 17:8061
ric-19 ~all neurons MBC 11: 3277
sak-1 BDU SDQ ALM CAN HSN PDE PVD AVM, others eiwm97.239
sdf-13 pharyngeal neruons ikatsura (pc)
sek-1 VCs, touch cells iwm99.829
sek-2 BDU SDQ ALM CAN HSN PDE PVD AVM, others eiwm97.239
sgs-1 "general neuronal expression" early ewm98.56***************
snb-1 ~all neurons J Neurosci 18:70
snt-1 ~all neurons Cell 73:1291
sra-1 SPDm/SPVm Cell 83:207
sra-10 URX ALS (phar nrns) Cell 83:207
sra-11 AIY AVB (and 1 pharyngeal nrn) Cell 83:207
sra-6 ASIf ASH SPDm/SPVm PVQ Cell 83:207
sra-7* ASK Cell 83:207
sra-9* ASK Cell 83:207
srb-6 ADL ADFf ASH PHx Cell 83:207
srg-2* ASK Cell 83:207
srg-8* ASK Cell 83:207
srd-1 ASI ADFm R8m/R9m? Cell 83:207
sre-1 ADL ASJf Cell 83:207
srg-13* PHA Cell 83:207
sro-1 ADL SIA Cell 83:207
str-1* AWB Cell 91:161
str-2** AWCL or AWCR wcwm98.28
str-3* ASI ?
syn-2 some v-cord nrns, some head nrns ecwm96.91
tab-1 AIB RIV AVJ iwm99.224
tax-2 AWC AFD ASE ASG ASJ ADE BAG ASK ASI... Neuron 17:695
AWB, occasionally: PQR PHAorB Neuron 17:695
related constructs label subsets Neuron 17:695
tax-4 ASE ASG ASI ASK URX AWB BAG AFD AWC ASJ Neuron 17:707
tig-2 pharyngeal nrns, ventral cord nrns iwm99.564
tph-1 serotonergic neurons NSM ADF HSN CPm iwm99.822
ttx-3* AIY iwm97.40
ttx-3 AIY AIA ASI ADL zaltun-gultekin, Development, in press
unc-3 ASI DB DA VB VA AS iwm97.228
unc-4 SAB DA I5 VA AVF VC Development 121:2877(pc)
unc-5 DA DB DD VD AS OLQ OLL IL2 RIA RIH ASE Development 127, 585
unc-8 BDU SABD PVM PVC AVB AVA AVD AVE AVJ...
PDA PDB DA DB DD VD VC VB HSN ASH FLP...
AVG AIB AIN AIZ, some other nrns ecwm96.20
unc-8 interneurons mtr neurons [c] iwm97.110(pc)
unc-11 ~all neurons aalfonso,mnonet(pc)
unc-17 head: IL2 URA URB SAA SAB SIA SIB SMB..
SMD RMD RIM, AIA sev more; phar: M1 M2 M5..
I1f I6f, others; body: VA VB VC DA DB..
AS SDQ HSNf; tail: ALN PLN others jduerr(pc); zaltun-gultekin et
al. Development, in press
unc-18 neuron specific, no id's eiwm97.221
unc-25 DD VD AVL DVB RME RIS J Neurosci 19: 6225
unc-29 VCs iwm99.878
unc-30 DD VD ASG RIDa RIHa Nature 372:780
unc-37 ~all: nrns, somatic, grm-line cells Development 124:1699
unc-40 AVM PVM HSN PVD PHx ADEp PDEp...
~all mtr nrns, 2-3 lumbar nrns...
1 labial nrn, RIMp or RICp or AVBp wbg 14(1):53
unc-43 many head/tail nrns, v.cord nrns, HSN early wcwm98.121
unc-47 DD VD AVL DVB RME RIS Nature 389, 870
unc-55 VDs iwm99.885
unc-64 ~all neurons mnonet(pc)
unc-86 UNC-86 in 57 nrns: incl. touch AIZ HSN eiwm97.584
unc-97 touch sensory neurons (ALM, PLM etc.) J Cell Biol 144: 45
unc-103 HSN (VAs, VBs, ASs most likely,..
VDs possible but less likely) NSM I2...
I1 AUA ADL ASK ALA ASJf URX SIA SMD...
IL2 URA URY OLQ PHA ALN PVP DVC ADE...
PDE PVD AVHp AVJp AVDp AINp ADAp RMGp..
RICp FLPp AIYp -AVL -DVB -DVA ...
//8 vulv mus 8 uterine muscles... dreiner(pc)
unc-115 ~all neurons wcwm96.53
unc-116 RMG RIFL RIS ADA ADE AIM AIY AVA...
AVB PVT PDB PDA, others. wbg 14(5).70
unc-119 ~all neurons Genetics 141:977
unc-129 DA DB some head neurons iwm97.56
vab-7 DB, two head neurons iwm97.570
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Unnamed
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(ZC506.4) RMD AIA PVQ, others wbg 14(3).40
(F19C6) AWC ASE ASH ASI ASJ ASK, others wcwm96.94
(WO2B3) many head/tail, esp. intr, mtrs wcwm96.94
(F53H8) AWC HSN, many other nrns wcwm96.94
(R13A1_4pGFP) PDA PDB DA DB DD VD...
AVA AVD AVE AVJ AVG AIB AIN and AIZ..
VC VB HSN ASH BDU SABD PVM PVC AVB wbg 14(3):47
(C16E9) a few nrns; eat-5-like connexn mwwm96.38
(???) RME VD DD wcwm96.123
(F59B2.13) DVA DVB DVC RMED RMEV acedb
(T23G5.5) ADE CEPD CEPV PDE acedb
(H20) ~all neurons tishihara(pc)
(ZC21.2) RMD SMD RIA RIB BAG AVA SIA VCs J Neurosci 17:8259
(C01C4.1) ASI ASE AWC PHB early ecwm98.136
(C05B5.7) ~all neurons early ecwm98.90
(C41G11.3) ~all neurons early ecwm98.90
(C29H12.3) seven amphid nrns PHA PHB early ecwm98.90
(F13B12) phar nrn, several head/tail early ecwm98.150
(M7.13) ASI Genes & Devel. 13:1794
(F47C12.5) ADL Genes & Devel. 13:1794
(T08G3.3) ADF Genes & Devel. 13:1794
(F52E4.4) DVA, if promoter tweaked Neuroscience 103:853
(F19D8.1 RIG, if pomoter tweaked Neuroscience 103:853
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Notes
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Data are for the hermaphrodite unless noted.
Expression in extra-neural tissue has not yet been included.
Expression patterns as detected by GFP expression unless noted.
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Key
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~all Most or all
XXXf Faint labeling
XXm Male expression
XXx All cell types with these two first letters
l Larval expression only
.. List continued on next line
... List continued on next line
c Conflict with other data on the same promotor, also [c]
(XXX) Faint or identity unsure (if my notes are unclear which)
XXXp Preliminary identification
* Single cell-type labeled with constructs using this promoter
- Definitely not expressed in this cell
nrn Neuron
intr Interneuron
mtr Motor neuron
bwm body wall muscle
eiwm Early international wm abstract
wcwm West coast worm meeting
mwwm Mid west worm meeting
ecwm East coast worm meeting
ewm European worm meeting
(pc) Personal communication
(ip) In press
SFNabs97.000 Abstr. Soc. NeurosciYY.NNN
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This catalog is a work in progress...Help make it better
Please submit corrections and new entries to:
Oliver Hobert
Shawn Lockery
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Submit new information as it comes available.
Catch errors.
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&backURL=%2Fhtbin%2Fwbgart%2F
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Credits
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This list is currently maintained by:
Oliver Hobert: or38@columbia.edu
Serge Faumont
Shawn Lockery: shawn@lox.uoregon.edu
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last updated: 15 Jun 2001
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